The price.you paid is not uncommon for that repair, but it’s a bit at the high end of the scale.
Brakes are important, so you recognized that and did research, so kudos to you for making the good effort.
Brake rotors, are bare metal. when they are made, they don’t want them to rust while sitting on the shelf waiting to be sold. That’s why they spray them with a rust inhibitor called cosmiline. Before a new rotor is installed, the technician cleans that off. If they leftnit on, it would greatly diminish the, stopping force of your brakes.
Brakes are designed to work on principals of friction. The caliper squeezes the pads together in order to press against both sides of the rotor, this slows your roll.
The caliper is mounted using two guide pins, or guide bolts as some folks call them. These guide pins have a special high temp lube that is held in with some small rubber covers. Over time, the lube for the guide pins does go away. When that lube is gone, the caliper can’t squeeze correctly on both sides of the rotor.
If someone always has a foot on the brake pedal, like an elderly person, the brakes get hot and stay hot and this eventually warps the brake rotor. A warp in a rotor is usually impossible to see with the naked eye, but in essence what was once a flat disc is now very slightly shaped like a Pringle chip. That means that the brake pedal will have a constant pulsation like you mentioned. It’s usually recommend to just replace the rotor at that point.
Keep in mind that even brand new rotors will rust. If the rust is less on one side by a wide amount than the other side, there is a slight chance that the cosmoline coating may still be partially on it, or the guide pins for the caliper were not lubed correctly on both sides, or the brake fluid could be getting old. It is also very likely that one side was closer to a moisture source overnight and simply got a little more rust because of that.
I will say that if you want top performance from your brakes, you should consider getting a brake fluid flush. The fluid gets old and over time will not make the caliper squeeze as hard as it should. Most shops charge $45-$90 for that. I suggest doing that every 2-3 years. I’ve seen people spend over $1300 for all new brakes front and rear, but the brake pedal would still hit the floor. I’ve seen those folks have me do a brake fluid flush only and the brakes performed amazingly well, like a brand new car. Can you see that I like brake fluid flushed?
Ok, to recap. I think your fine with the asymmetrical rotor rust. As far as what you were charged, it’s within range too. A little high, but given that they are known for doing good work I’m not surprised that they are a little high on price.
Look into a brake fluid flush sometime soon, you will be happy you did.
If the car pulls hard to one side over the other while braking all the time, then you should go back to the shop and ask them to make certain the caliper guide pins have been properly lubricated.